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emtrends 中的自定义对比

发布时间:2022-07-24 07:55:04 275
# 数据

有了这个示例数据集

dat <- data.frame(sample=c(1,2,3,4,5,6, 7,8,9,10,11,12,13,14), treatment=c(1,2,3,4,5,6, 1,2,3,4,5,6,7,8), condition=factor(c("A","A","A","A","A","A", "B","B","B","B","B","B","B","B")), scores=c(2,4,3,5,6,13, 41,30,30,23,24,24,10,8))

mod <- lm(scores~treatment*condition, data=dat)

我设置了自定义对比来查看 cross 的线性增加和cross变量condition A的treatment线性减少:condition Btreatment

con <- matrix(c(contr.poly(6)[,1],rep(0,8),rep(0,6),contr.poly(8)[,1]*-1), ncol=2)
con
            [,1]        [,2]
 [1,] -0.5976143  0.00000000
 [2,] -0.3585686  0.00000000
 [3,] -0.1195229  0.00000000
 [4,]  0.1195229  0.00000000
 [5,]  0.3585686  0.00000000
 [6,]  0.5976143  0.00000000
 [7,]  0.0000000  0.54006172
 [8,]  0.0000000  0.38575837
 [9,]  0.0000000  0.23145502
[10,]  0.0000000  0.07715167
[11,]  0.0000000 -0.07715167
[12,]  0.0000000 -0.23145502
[13,]  0.0000000 -0.38575837
[14,]  0.0000000 -0.54006172

是否可以计算这些对比emmeans?

我知道我可以做到emm <- emtrends(mod, ~ condition, var="treatment"),这适合线性函数,但是如果我想使用我的自定义对比,可以将它们合并到 中emtrends吗?

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